BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009E03SP1|AL426041
(850 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1741 1685 0.0
>3x_Contig1741
Length = 21706
Score = 1685 bits (850), Expect = 0.0
Identities = 850/850 (100%)
Strand = Plus / Minus
Query: 1 aatggacttggccctaagtgttgccattgggtcctcactacaaattgcccttttcgtgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2544 aatggacttggccctaagtgttgccattgggtcctcactacaaattgcccttttcgtgac 2485
Query: 61 tccattcatggtactagtgggatgggccattgatgtgccaatgacattgaacttctctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2484 tccattcatggtactagtgggatgggccattgatgtgccaatgacattgaacttctctac 2425
Query: 121 attcgagaccgttattatgttggtttcggtgttcctatctaactacttgatcctcgatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2424 attcgagaccgttattatgttggtttcggtgttcctatctaactacttgatcctcgatgg 2365
Query: 181 tgaatccaattggatggaagggtccatgtcgctagccatgtatgcgctagtcgccttggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2364 tgaatccaattggatggaagggtccatgtcgctagccatgtatgcgctagtcgccttggc 2305
Query: 241 attcttctactacccagatgaacaggcagtgaattaaatgatcttcttatccgattatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2304 attcttctactacccagatgaacaggcagtgaattaaatgatcttcttatccgattatta 2245
Query: 301 cttttcttcctttccctatcaaagcacaaggccccaaaaaccaaaaaaaaatctataaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2244 cttttcttcctttccctatcaaagcacaaggccccaaaaaccaaaaaaaaatctataaac 2185
Query: 361 actactcactaactctctccaagatgactagttcacatacatgaatcatacggtatattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2184 actactcactaactctctccaagatgactagttcacatacatgaatcatacggtatattt 2125
Query: 421 ccccgtaccgtgctgtgtatcaatttctaactattttctctgtatcataaagaaaactac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2124 ccccgtaccgtgctgtgtatcaatttctaactattttctctgtatcataaagaaaactac 2065
Query: 481 cggtgtatagacaatctcaaaattactataaaactgaatttctcgaaaaccagcatttgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2064 cggtgtatagacaatctcaaaattactataaaactgaatttctcgaaaaccagcatttgc 2005
Query: 541 tattttttcagttgttccttttcaaaattttcgctttttccaagttcatcagaatttcgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2004 tattttttcagttgttccttttcaaaattttcgctttttccaagttcatcagaatttcgc 1945
Query: 601 gagttccttaatttaaactatgaacacgaaaaagctggcagaaatttacttcattgcagg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1944 gagttccttaatttaaactatgaacacgaaaaagctggcagaaatttacttcattgcagg 1885
Query: 661 gttttctatggatcgcaaagagtgaggttttctaaaaccagctattagaggttcaaagtg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1884 gttttctatggatcgcaaagagtgaggttttctaaaaccagctattagaggttcaaagtg 1825
Query: 721 aaacatgaaacaacggatcgctgagaacttgggaaatggcgagcgatccgatcatggggc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1824 aaacatgaaacaacggatcgctgagaacttgggaaatggcgagcgatccgatcatggggc 1765
Query: 781 gatgcgttaatatgcgagcgatacttctataattatatgcgagcacatccatgtgtatat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1764 gatgcgttaatatgcgagcgatacttctataattatatgcgagcacatccatgtgtatat 1705
Query: 841 atatatatat 850
||||||||||
Sbjct: 1704 atatatatat 1695
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,209
Number of Sequences: 1807
Number of extensions: 10209
Number of successful extensions: 1052
Number of sequences better than 1.0e-20: 1
length of query: 850
length of database: 10,358,551
effective HSP length: 16
effective length of query: 834
effective length of database: 10,329,639
effective search space: 8614918926
effective search space used: 8614918926
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)